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zxhproj v 2.2
zxhproj
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zxhproj v 2.2
zxhproj
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transform fields in each dimension as a transformations the dimension of image and voxels should be the same between the transform fields and reference images transform field images are gipl and unit of millbimetre transform point, if the point is not in the grid, then linear interpolation this transformation type can NOT be gradient type at this moment More...
#include <zxhTransformFields.h>
Public Member Functions | |
| zxhTransformFields (void) | |
| construct | |
| ~zxhTransformFields (void) | |
| destruct | |
| virtual std::string | GetTransformType () |
| return image type string in upper case, currently have GIPL, AFF, FFD | |
| virtual zxhTransformBase * | Clone (zxhTransformBase *&pRet) |
| if pRet==0, new one object in method of clone | |
| virtual void | TransformWorldToWorld (const float fVectorFromWorld[ImageDimensionMax], float fVectorToWorld[ImageDimensionMax]) |
| virtual bool | SetTransformFromStream (std::ifstream &ifs) |
| read transformation from stream, donot care the comments {return false;} | |
| virtual bool | SetTransformIdentity () |
| set transformation as a identity transform | |
| virtual std::string | GetPrintString () |
| virtual bool | SaveTransform2Disc (std::string sFileNameWithoutExt) |
| save to disc | |
| virtual bool | ElasticRegularizationDeformationFeild (float *sigmasmm) |
| float sigmas is the isotropic standard deviation in mm | |
| virtual bool | SetTransformFieldsFromFiles (char *pFilename[ImageDimensionMax]) |
| virtual bool | SetTransformFieldsFromFiles (std::string pFilename[ImageDimensionMax]) |
| virtual bool | SetTransformFieldsFromFiles (std::string pFileX, std::string pFileY, std::string pFileZ) |
| set transform feild gipl files for 3D | |
| virtual bool | CloneTransformFieldsFromImages (zxhImageDataT< float > *pX, zxhImageDataT< float > *pY, zxhImageDataT< float > *pZ) |
| return same feild image same size dim | |
| virtual bool | CloneTransformFieldsFromToWorldImages (zxhImageDataT< float > *ptwX, zxhImageDataT< float > *ptwY, zxhImageDataT< float > *ptwZ) |
| return same feild image same size dim | |
| virtual zxhImageDataT< float > * | GetTransformFieldImages () |
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virtual zxhImageModelingLinearT< float, float > * | GetTransformFieldModels () |
| virtual int | GetNoParameters () |
| virtual float | GetParameters (int index) |
| virtual bool | SetParameterValue (int index, float f) |
| virtual bool | SetTransformFieldsOrientationInfo (zxhImageInfo *pimageinfo) |
| virtual void | NewTransformImages (int dim, const int *size, const float *spacing, const zxhImageInfo *pimageinfo) |
| virtual void | ReleaseMemOfTransformImages () |
| virtual float | GetMaxLocalMagnitudeAndNormalisation (bool bNormalisationByLocalMagnitude) |
| for optimization step length normalization | |
| virtual bool | ConvertTransformToField (zxhTransformBase *pt, const zxhImageInfo *pimageinfo) |
Protected Member Functions | |
| bool | CheckTranformFieldSameDimSizeSpacing () const |
Protected Attributes | |
| std::string | m_strTransformFieldImageFiles [ImageDimensionMax] |
| zxhImageDataT< float > | m_pimgTransformFields [ImageDimensionMax] |
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zxhImageModelingLinearT< float, float > | m_pmodelTransformFields [ImageDimensionMax] |
| should be SameDimSizeSpacing and orientation | |
transform fields in each dimension as a transformations the dimension of image and voxels should be the same between the transform fields and reference images transform field images are gipl and unit of millbimetre transform point, if the point is not in the grid, then linear interpolation this transformation type can NOT be gradient type at this moment
1st May 2007 the dimension of image and voxels between transform fields and test/ref image don't have to be the same
| int zxhTransformFields::GetNoParameters | ( | ) | [virtual] |
virtual bool Multiply(float);
Implements zxhTransformBase.
| std::string zxhTransformFields::GetPrintString | ( | void | ) | [virtual] |
description of the transformation type(not gradient), can be saved to disk as a file and read by SetTransformFromFile {return "have not defined";}
Reimplemented from zxhTransformBase.
| bool zxhTransformFields::SetParameterValue | ( | int | index, |
| float | f | ||
| ) | [virtual] |
set transformation parameter value, if the transformation model need pre-computation from parameters for efficiency such as affine, then re-implement this function to call the pre-computation method after set the value
Implements zxhTransformBase.
| bool zxhTransformFields::SetTransformFieldsFromFiles | ( | char * | pFilename[ImageDimensionMax] | ) | [virtual] |
set transform field gipl files set dimension first before using this method
| bool zxhTransformFields::SetTransformFromStream | ( | std::ifstream & | ifs | ) | [virtual] |
read transformation from stream, donot care the comments {return false;}
1) use file path in FLD 2) use folder path of FLD plus file name in FLD 3) use file name without .FLD plus _?.imagetype
1) use file path in FLD
2) use folder path of FLD plus file name in FLD
3) use file name without .FLD plus _?.imagetype
Reimplemented from zxhTransformBase.
1.7.3 
