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zxhproj v 2.2
zxhproj
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zxhproj v 2.2
zxhproj
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: record image info ; when copy or remove orientation info, always use method(-2) More...
#include <zxhImageInfo.h>
Public Member Functions | |
| virtual zxhImageInfo * | Clone (zxhImageInfo *&pRet) const |
| new an image and clone | |
| virtual void | RemoveOrientationInfo () |
| remove orientation or set orientation info to identity | |
| virtual void | CopyOrientationInfoFrom (const zxhImageInfo *pSource) |
| set orientation correspondingly using source info without guarantee consistent, need to call update afterwards | |
| virtual void | SetOrientationQuaternFrom (const zxhImageInfo *pSource) |
| set orientation using quatenion paramters | |
| virtual void | UpdateOrientationInfo (int iOrientatationMethod) |
| virtual bool | SameDimSizeSpacingAs (const zxhImageInfo *pTest) const |
| whether two images have same image and voxel dimensions | |
| virtual bool | SameOrientationAs (const zxhImageInfo *pTest) const |
| whether two images have same image and voxel dimensions | |
| virtual void | GetExtent (float e[]) const |
| virtual void | GetExtent (float worldfrom[], float worldto[]) const |
| return the start and end of extent in world coordinates | |
| virtual int | GetNumberOfPixels () const |
| virtual void | GetSizeUsingExtent (const float e[ImageDimensionMax], int s[ImageDimensionMax]) const |
| get new size if change to different extent | |
| virtual void | GetSizeUsingSpacing (const float sp[ImageDimensionMax], int sz[ImageDimensionMax]) const |
| get new size if change to different spacing | |
| virtual std::string | GetPrintString () const |
| void | WorldToImage (float fv[]) const |
| void | ImageToWorld (float fv[]) const |
| void | ImageToPhysical (float fv[]) const |
| void | PhysicalToImage (float fv[]) const |
| void | ProjectPhysVectorToWorldCoordinate (float &fvx, float &fvy, float &fvz) const |
| void | ProjectWorldVectorToPhysCoordinate (float &fvx, float &fvy, float &fvz) const |
| int | GridToIndex (int ix, int iy, int iz=0, int it=0) const |
| image grid indices to imagedata index | |
| void | IndexToGrid (const int index, int *ix, int *iy, int *iz=0, int *it=0) const |
| image data index to image grid indices | |
Static Public Member Functions | |
| static short | Analyze_to_gipl_type (short analyze_type) |
| analyze_to_gipl_type: Convert from Analyze/nifti to gipl image types | |
| static short | Gipl_to_analyze_type (short gipl_type) |
Public Attributes | |
| std::string | FileName |
| int | Dimension |
| std::string | ImageFormat |
| image format is related to datatype | |
| zxhushort | DataType |
| data type, definition is based on GIPL_??? ONLY | |
| int | ByteOfDataType |
| int | OrientationMethod |
| define orientation method | |
| float | Spacing [ImageDimensionMax] |
| image spacing info default 1, [0-2] unit is mm, [3]is temporal dimension and unit is ms | |
| int | Size [ImageDimensionMax] |
| image size default 1, [3] is num. of phases | |
| float | Origin [ImageDimensionMax] |
| gipl origin | |
| float | OrientationRotationMatrix [3][3] |
| float | QuaternFactor |
| Quaternion factor, sign of spacingZ step (< 0 is negative, improper left-hand coordinate; >= 0 is positive, proper right-hand coordinate) | |
| float | QuaternB |
| Quaternion b parameter. | |
| float | QuaternC |
| Quaternion c parameter. | |
| float | QuaternD |
| Quaternion d parameter. | |
| float | Qoffsetxyz [3] |
| Quaternion x,y,z shift. | |
| float | ImageToWorldMatrix [4][4] |
| float | WorldToImageMatrix [4][4] |
: record image info ; when copy or remove orientation info, always use method(-2)
| void zxhImageInfo::UpdateOrientationInfo | ( | int | iOrientatationMethod | ) | [virtual] |
update orientation method 1,2,-2,3 using given method always assume spacing set, method1 will update all the others, while the others do not update method1 set OrientationMethod at the end
| float zxhImageInfo::OrientationRotationMatrix[3][3] |
orientation rotation matrix (ORM) ; ORM[0-2][0] is x-axis, ORM[0-2][1] is y-axis, ORM[0-2][2] is z-axis notice that x-axis -> gipl.header[106,110,114]; y-axis -> gipl.header[122,126,130] ImageToWorldMatrix = [identity origin] x [ORM 0] x [scaling matrix] x [identity -(image_size-1)/2]
1.7.3 
