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NCBI BLAST Results


Program
BLASTN
Version
2.2.25 [Feb-01-2011]
Database
em_rel
Title
Launched Date
Wed, Apr 04, 2012 at 10:23:26
End Date
Wed, Apr 04, 2012 at 10:30:06
Input Sequence
ncbiblast-I20120404-102326-0523-51914804-pg.input
Output Result
ncbiblast-I20120404-102326-0523-51914804-pg.output

Command

/nfs/public/ro/es/appbin/linux-x86_64/ncbi-blast-2.2.25/bin/blastall -p blastn -d "em_rel" -i ncbiblast-I20120404-102326-0523-51914804-pg.sequence -a 16 -b 50 -v 50 -e 10 -X 0 -r 1 -q -3 -G 5 -E 2 -F T -g T -m 0

Input parameters

Program
blastn
Matrix
BLOSUM62
Alignments
50
Scores
50
Expectation value threshold
10
Dropoff
0
Match/mismatch scores
1,-3
Gap open
5
Gap extend
2
Filter
T
Sequence range
START-END
Gapalign
true
Align views
0
Translation table
-1
Sequence type
dna
Database
em_rel