95 files
W.Langdon 29 Dec 2021
ntrees.cc ntreeshape.cc now in https://github.com/wblangdon/ntreeshape
W. B. Langdon and B. F. Buxton.
Genetic Programming for Mining DNA Chip data from Cancer Patients. GP+EM
Pomeroy_et_al_0G04850_11142001_datasets/
GPinc.tar.gz fastest single computer GP EuroGP 2021
GPavx.tar.gz fastest single computer GP RN/19/01
gi_cbrt.tar.gz
Code for genetic improvment via data for various GNU C library support
routines cbrt, log, 1/x, x**(-0.5)
efficient_memory/
demo of Koza's alg to use only 2 extra buffers for generational GA
cf SIGEVOLution, 2020 13(4) p2-4 doi:10.1145/3430913.3430914
exact_marp0.awk for "Exact Mean Absolute Error of Baseline Predictor, MARP0",
WB Langdon, et al., Information and Software Technology
Genetic Improvement system to evolve better pknotsRG: pknotsGI.tar.gz
Genetic Improvement system for better BarraCUDA: barracuda_gp.tar.gz
Training data for BarraCUDA: see directory barracuda_0.7.105/
Current release http://sourceforge.net/projects/seqbarracuda/
Genetic Improvement system to evolve better NiftyReg niftycuda.tar.gz
Improved code for NiftyReg nifty_reg-1.3.9_patch.tar.gz
GI system to evolve better StereoCamera: StereoCamera_1_1.tar.gz
Training images: StereoImages.tar.gz
Geneticaly Improved StereoCamera: StereoCamera_v1_1c.zip
Genetic Improvement of Bowtie2: see directory bowtie2gp
BNF grammar and training examples for CUDA gzip code langdon_2010_cigpu.tar.gz
Sub machine code GP running under CUDA for nVidia GPU/Tesla gp32cuda.tar.gz (v1.1)
Nuclear Protien localisation test dataset wbl_gecco2004lb_protein.tar.gz
GPU Genetic programming C++ code gpu_gp_2.tar.gz gp32cuda.tar.gz
random-numbers/gpu_park-miller.tar.gz
random-numbers/cuda_park-miller.tar.gz
Genetic programming C++ code
Genetic programming C++ code to evolve data structures
GPdata-3.0.tar.gz contains a version of Andy Singleton's GP-Quick
version 2.1 which has been extensively altered to support:
Indexed memory operation (cf. teller)
multi tree programs
Adfs
parameter changes without recompilation
populations partitioned into demes
(A version of) pareto fitness
Like GP-Quick, this software is free for non commercial use and is
unsupported.
Usage:
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Some documentation included. See also
ftp::/cs.ucl.ac.uk/genetic/papers/GPdata-icga-95.ps
GPdata-3.0.test.tar.gz contains sample output
Major changes since GPdata-20-aug-95.tar.Z
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GPdata-3.0.tar.gz superceeds previous versions. Now includes support for
ant Original ant problem, and upgrade used in bloat paper in WSC2
stack Evolve a stack data structure ICGA-95
queue Evolve a queue data structure ICGA-95
list Evolve a list data structure AiGP2
brack Evolve nested bracket language recogniser GP-96
karp Evolve dyck language recogniser GP-96
rpn Evolve Reverse Polish Notation calculator GP-96
max Studies of MAX problem (largest possible value tree) GP-97
Major changes since GPdata-1-dec-94.tar.Z (from work on list problem)
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New Primitives
forewhile and other loops, print, swap, FUNC
more flexibity on different memory index errors
Pareto Elitism and Niching
Directed crossover (at tree level)
CPU usage as part of fitness function
Code speedups
Reusing fitness information by offspring
Aux1_caching
Reduce memory required by population
Support for
Separate test script, including multiple test phases.
(gzipped) checkpoint file.
gcc version 2.6.3
Improved error checking on loading an individual
Better display of population statistics
frequency of primitive usage.
Add monitoring lost primitives and problem dependent
combinations of primitives.
some offline gnuplot support.
GPdata_gp96.test.tar.Z (replaced by grammar_test_ilp.tar.gz)
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Contains three sets of test cases for the problems described in
WBL.gp96.ps The problems are recognising balanced brackets, balanced
brackets of different types and evaluation reverse polish integer
expressions. See Chapter 7 "Genetic Programming and Data Structures".
randspace.tar.gz randspace.zip
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C++ code for random tree fitness decribed in PPSN'2000 paper
"Genetic Programming Bloat without Semantics"
GProc-1.1.tar.gz to GProc-1.8.tar.gz
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C++ code for using GP to combine existing classifiers. Uses reciever
operating characteristics of composite classifier to guide
evolutionary search. Contains SUN and WindowsNT executables.
Technique described in (for example) "Genetic Programming for Combining
Neural Networks for Drug Discovery", W. B. Langdon and S. J. Barrett
and B. F. Buxton, Soft Computing and Industry Recent Applications,
597-608, Springer Verlag. Published 2002. genetic/papers/WBL_wsc6.pdf
dgpc.tar.gz c2003dgpcdave.pdf
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Dave's [Andre] Genetic Programming Code, C
Copied (8 August 2004) from http://www.genetic-programming.com/dgpc.tar.gz
tiny_gp/ Riccardo Poli's Tiny GP in C
polygp.tar.gz copy of https://github.com/yangsiwei880813/PolyGP via George Gerules
Name Last modified Size Description
Parent directory
antsol.tar.gz 09-Apr-01 11:57 48K
barracuda_0.7.105/ 18-Apr-15 11:25 -
c2003dgpcdave.pdf 08-Aug-04 15:58 129K
chrome.cxx 09-Apr-01 11:57 98K
chrome.h 09-Apr-01 11:57 33K
exact_marp0.tar 13-Jan-16 13:34 10K
95 files