1. Arridge, S.R., Moss, J.P., Linney, A.D., James, D.R, 1985 "Three Dimensional Digitisation of the Face and Skull", Journal of Maxillofacial Surgery, 3(13), 136-143.
2. Moss, J.P., Linney, A.D., Grindrod, S.R., Arridge, S.R., 1987, "Three-Dimensional Visualization of the Face and Skull Using Computerized Tomography and Laser Scanning Techniques", European Journal of Orthodontics, 9(4), 247-253.
3. Delpy, D.T., Cope, M., van der Zee, P., Arridge, S.R., Wray, S., Wyatt, J.S. 1988, "Estimation of optical pathlength through tissue from direct time of flight measurement", Phys. Med. & Biol., 33, 1433-1442.
4. Moss, J.P., Linney, A.D., Grindrod, S.R., Arridge, S.R. 1988 "A Computer system for the interactive planning and prediction of maxillofacial surgery" American Journal of Orthodontics and Dentofacial Orthopedics, 94, 469-475.
5. Arridge S.R., 1989, "A note on the spherical harmonic expansion of the Mie scattering kernel", J.Mod.Opt, 36(6), 685-692.
6. Arridge, S.R., Grindrod, S.R., Linney, A.D., Tofts, P.S., Wicks, D., 1989, "Use of greyscale voxel databases for improved shading and segmentation", Medical Informatics, 14(2), 157-171.
7. Linney, A.D., Grindrod, S.R., Arridge S.R., Moss, J.P., 1989, "Three dimensional visualisation of CT and laser scan data for the simulation of facial reconstructive surgery", Medical Informatics, 14(2), 109-121.
8. Arridge, S.R., van der Zee, P., Delpy, D.T., Cope, M., 1989, "Particle sizing in the Mie scattering region : singular value analysis", Inverse Problems, 5(5), 671-689.
9. Wyatt, J.S., Cope, M., Delpy, D.T., van der Zee, P., Arridge, S.R., Edwards, A.D., Reynolds, E.O.R, 1990, "Measurement of optical pathlength for cerebral near infrared spectroscopy in newborn infants", Dev. Neuroscience, 12, 140-144.
10. Arridge, S.R., Cope, M., Delpy, D.T., 1992, "Theoretical basis for the determination of optical pathlengths in tissue : temporal and frequency analysis", Physics in Medicine and Biology, 37(7), 1532-1560.
11. Essenpreis, M., Elwell, C.E., Cope, M., van der Zee, P., Arridge, S.R., Delpy, D.T., 1992, "Spectral dependence of temporal point spread functions in human tissues", Applied Optics, 32(4), 418-425.
12. Arridge, S.R., Schweiger, M., Hiraoka, M., Delpy, D.T., 1993, "A Finite Element approach to modelling photon transport in tissue", Medical Physics, 20(2), 299-309.
13. Schweiger, M., Arridge, S.R., Delpy, D.T., 1993, "Application of the Finite Element Method for the forward and inverse problem in optical tomography", Journal of Mathematical Imaging and Vision, 3(3), 263-283
14. Hiraoka, M., Firbank, M., Essenpreis, M., Cope, M., Arridge, S.R., van der Zee, P., Delpy, D.T., 1993, "A Monte Carlo investigation of optical pathlength in inhomogeneous tissue and its application to near-infrared spectroscopy", Physics in Medicine and Biology, 38, 1859-1876.
15. J.C.Hebden, S.R.Arridge, D.T.Delpy, 1993, "Infrared lasers muscle in on medical imaging", Physics World, 6(8), 23-24.
16. Simmons, A., Barker, G.J., Tofts, P.J., Gass, A., Arridge, S.R., 1994, "A method for visualisation of MRI partial volume regions - PAIR (PArtial volume sensitised Inversion Recovery imaging)", Magnetic Resonance Imaging, 12(5), 821-826.
17. Simmons, A., Tofts, P.J., Barker, G.J., Arridge, S.R., 1994, "Sources of intensity non-uniformity in spin echo images at 1.5T", Magnetic Resonance in Medicine, 32(1), pp 121-128.
18. Simmons, A., Arridge, S.R., Barker, G.J., Cluckie, A.J., Tofts, P.J., 1994, "Improvements to the quality of MRI cluster analysis", Magnetic Resonance Imaging, 12(8),1191-1204
19. Arridge, S.R., Schweiger, M., 1995, "Direct Calculation of the moments of the distribution of photon time of flight in tissue, using a Finite Element Method", Applied Optics, 34(15), 2683-2687.
20. Arridge, S.R., Hiraoka, M., Schweiger, M., 1995, "Statistical basis for the determination of optical pathlengths in tissue", Physics in Medicine and Biology, 40, 1539-1558.
21. Arridge, S.R., 1995, "Photon measurement density functions, Part I : analytical forms", Applied Optics, 34(31), 7395-7409.
22. Arridge, S.R., Schweiger, 1995, "Photon measurement density functions, Part II: Finite Element results", Applied Optics, 34(34), 8026-8037.
23. Schweiger, M., Arridge, S.R., Hiraoka, M., Delpy, D.T., 1995, "The Finite Element method for the propagation of light in scattering media : boundary and source conditions", Medical Physics, 22(11), 1779-1792.
24. Simmons, A., Arridge, S.R., Barker, G.J., Williams S.C.R., 1996, "Simulation of MRI Cluster Plots and Application to Neurological Segmentation", Magnetic Resonance Imaging, 14(1), 73-92.
25. Okada, E., Firbank, M., Schweiger, M., Arridge, S.R., Delpy, D.T., 1996, "Analysis of light propogation in inhomogeneous turbid media by time-resolved measurement", Japanese Journal of Optics, 25(1), 33-41.
26. Okada, E., Schweiger, M., Arridge, S.R., Firbank, M., Delpy, D.T., 1996, "Experimental Verification of Monte Carlo and Finite Element Methods for the estimation of the optical pathlength in inhomogeneous tissue", Applied Optics, 35(19), 3362-3371.
27. J. C. Hebden and S. R. Arridge, 1996, "Imaging through scattering media by the use of an analytical model of perturbation amplitudes in the time domain" Applied Optics, Vol. 35, No. 34, 6788-6796.
28. Okada, E., Firbank, M., Schweiger, M., Arridge, S.R., Cope, M., Delpy, D.T., 1997, "A theoretical and experimental investigation of near infrared light propagation in a model of the adult head", Applied Optics, 36(1), 21-31
29. Hebden, J.C., Arridge, S.R., Delpy, D.T., 1997, "Optical imaging in medicine:I. Experimental techniques", Physics in Medicine and Biology, 42(5), 825-840.
30. Arridge, S.R., Hebden, J.C., 1997, "Optical imaging in medicine:II. Modelling and reconstruction", Physics in Medicine and Biology, 42(5), 841-853.
31. Arridge, S.R., Schweiger, M., 1997, "Image reconstruction in optical tomography", Phil. Trans. R. Soc. Lond : B, 352, 716-726
32. Schweiger, M., Arridge, S.R., 1997, "The Finite Element method for the propagation of light in scattering media : frequency domain case", Medical Physics, 24(6), 895-902.
33. Schweiger, M., Arridge, S.R., 1997, "Direct Calculation of the Laplace Transform of the distribution of photon time of flight in tissue, using a Finite Element Method", Applied Optics, 36, 9042-9049.
34. Arridge, S.R., Schweiger, M., 1998, "A gradient-based optimisation scheme for Optical Tomography", Optics Express, 2(6), 213-226.
35. Arridge, S.R., Lionheart., W. R. B. , 1998, "Non-Uniqueness in Diffusion-Based Optical Tomography",Optics Letters, 23, 882-884.
36. Barker, G.J., Simmons, A., Arridge, S.R., Tofts, P.S., 1998, "A Simple Method for Investigating the Effects of Non-Uniformity of RadioFrequency Transmission and RadioFrequency Reception in MRI", Br. J. Radiology, 71, 59-67.
37. Schnabel, J.A., Arridge, S.R., 1998, "Active Shape Focusing", Image Vision Computing, 17(5-6), 419-428.
38. Lester, H., Arridge, S.R., 1999, "A survey of hierarchical non-linear medical image registration", Pattern Recognition, 32, 129-149.
39. Schweiger, M., Arridge, S.R., 1998, "Comparison of 2D and 3D reconstruction methods in optical tomography", Applied Optics, 37(31), 7419-7428.
40. Simmons, A., Arridge, S.R., Barker, G.J., Tofts, P.S., 1998, "Application of the Stack to Neurological MRI", IEEE Trans. Medical Imaging, 17(2), 371-382.
41. S.R. Arridge, 1999, "Optical Tomography in Medical Imaging", Topical Review, Inverse Problems, 15, R41-R93.
42. Hebden J. C., Schmidt F.E.W., Fry M. E., Schweiger M., Hillman E. C., Delpy D. T., Arridge S. R., 1999, "Simultaneous Reconstruction of Absorption and Scattering Images by Multichannel measurement of Purely temporal Data", Optics letters, 24(8), 534-536.
43. Schweiger, M., Arridge, S.R., 1999, "Optical Tomographic Reconstruction in a Complex Head Model Using a priori Region Boundary Information",Phys. Med. Biol., 44, 2703-2721.
44. Schweiger, M., Arridge, S.R., 1999, "Application of Temporal filters to time-Resolved Data in Optical Tomography",Phys. Med. Biol., 44, 1699-1717.
45. Kolehmainen, V., Arridge, S.R. Lionheart, W.R.B., Vauhkonen, M., Kaipio, J., 1999, "Recovery of region boundaries of piecewise constant coefficients of an elliptic PDE from boundary data", Inverse Problems, 15, 1375-1391.
46. Arridge, S.R., Dehghani H., Schweiger, M., Okada E., 2000,"The Finite Element method for the propagation of light in scattering media : a direct method for domains with non-scattering regions", Medical Physics, 27(1), 252-264.
47. Dehghani H., Arridge, S.R., Schweiger, M., Delpy, D.T., 2000,"Optical Tomography in the presence of void regions", J. Opt. Soc. Am., 17(9), 1659-1670.
48. Ripoll, J., Arridge, S.R., Dehghani H., Nieto-Vesperinas, M., 2000,"Boundary conditions for light propagation in diffusive media with nonscattering regions", J. Opt. Soc. Am., 17(9), 1671-1681.
49. Arridge, S.R., Hebden, J.C., Schweiger, M., Schmidt, F.E.W., Fry, ME, Hillman, E.M.C., Dehghani, H, and Delpy, D.T. (2000): "A method for 3D time-resolved optical tomography", International Journal for Imaging Systems and Technology 11, 2-11.
50. Hillman, E.M.C., Hebden, J.C., Schmidt, F.E.W., Arridge, S.R., Schweiger, M., Dehghani, H, and Delpy, D.T. (2000): "Calibration techniques and datatype extraction for time-resolved optical tomography", Review of Scientific Instruments, 71(9), 3415-3427.
51. Kolehmainen, V, Arridge, S.R., Vauhkonen, M, and Kaipio, J.P. (2000): "Simultaneous reconstruction of internal tissue region boundaries and coefficients in optical diffusion tomography", Physics in Medicine and Biology 45(11), 3267-3284
52. Kolehmainen, V, Vauhkonen, M, Kaipio, JP, and Arridge, S.R. (2000): "Recovery of piecewise constant coefficients in optical diffusion tomography", Optics Express, 7(13), 468-480.
53. Riley, J, Dehghani, H, Schweiger, M, Arridge, S.R., Ripoll, J, and Nieto-Vesperinas, M (2000): "3D optical tomography in the presence of void regions", Optics Express 7(13), 462-467.
54. Hebden, J.C., Veenstra, H, Dehghani, H, Hillman, E.M.C., Schweiger, M, Arridge, S.R., and Delpy, D.T. (2001): "Three dimensional time-resolved optical tomography of a conical breast phantom", Applied Optics, 40, 3278-3287
55. Hillman, E.M.C., Hebden, J.C., Schweiger, M, Dehghani, H, Schmidt, FEW, Delpy, DT, and Arridge, S.R. (2001): "Time resolved optical tomography of the human forearm", Physics in Medicine and Biology, 46, 1117-1130.
56. Coulon, O., Hickman, S. J., Parker, G. J., Barker, G. J., Miller, D.H., Arridge, S.R., (2002), "Quantification of Spinal Cord Atrophy from Magnetic Resonnance Images via a B-spline Active Contour Model", Magnetic Resonance in Medicine, 47, 1176-1185.
57. Hebden, J.C., Gibson, A.P., Yusof, R, Everdell, N.L., Hillman, E.M.C., Delpy, D.T., Arridge, S.R., Austin, T, Meek, J.H., and Wyatt, J.S. (2002): "Three-dimensional optical tomography of the premature infant brain", Physics in Medicine and Biology, 47, 4155-4166
58. Gibson, A.P., Yusof, R, Dehghani, H, Riley, J, Everdell, N.L., Richards, R, Hebden, J.C., Schweiger, M, Arridge, S.R., and Delpy, D.T. (2003): "Optical tomography of a realistic neonatal head phantom", Applied Optics, 42, 3109-3116.
59. Gibson, A.P., Riley, J., Schweiger, M., Hebden, J.C., Arridge, S.R., and Delpy, D.T. (2003): "A method for generating patient-specific finite element meshes for head modelling", Physics in Medicine and Biology, 48, 481-495.
60. Heino, J., Arridge, S.R., Sikora, J., and Somersalo, E. (2003): "Anisotropic effects in highly scattering media", Physical Review E, 68, Article number 31908.
61. Kolehmainen, V., Prince, S., Arridge, S.R., and Kaipio, J.P. (2003): "State estimation approach to non-stationary optical tomography problem", Journal of the Optical Society of America A, 20, 876-889.
62. Prince, S., Kolehmainen, V., Kaipio, J.P., Franceschini, M.A., Boas, D., and Arridge, S.R. (2003): "Time-series estimation of biological factors in optical diffusion tomography", Physics in Medicine and Biology, 48, 1491-1504.
63. Schweiger, M., Gibson, A.P., and Arridge, S.R., (2003): "Computational aspects of diffuse optical tomography", IEEE Computing in Science and Engineering, Nov/Dec 2003, 33-41
64. Hebden, J.C., Gibson, A.P., Austin, T, Yusof, R, Everdell, N.L., Delpy, D.T., Arridge, S.R., Meek, JH, and Wyatt, JS (2004): "Imaging changes in blood volume and oxygenation in the newborn infant brain using three-dimensional optical tomography", Physics in Medicine and Biology, 49, 1117-1130.
65. Coulon, O. P., Alexander, D. C., Arridge, S. R. (2004) :"Diffusion tensor magnetic resonance image regularization", Medical image analysis 8(1), 27-47 doi:10.1016/j.media.2003.06.002.Link to online paper.
66. Choe, R, Corlu, A, Lee, K, Durduran, T, Konecky, SD, Grosicka-Koptyra, M, Arridge, S.R., Czerniecki, BJ, Fraker, DL, DeMichele, A, Chance, B, Rosen, MA, and Yodh, AG (2005): "Diffuse optical tomography of breast cancer during neoadjuvant chemotherapy: A case study with comparison to MRI", Medical Physics, 32(4), 1128-1139.
67. Corlu, A, Choe, R, Durduran, T, Lee, K, Schweiger, M, Arridge, S.R., Hillman, E.M.C., Yodh, AG (2005): "Diffuse optical tomography with spectral constraints and wavelength optimization", Applied Optics, 44(11), 2082-209
68. Dierkes, T, Grosenick, D, Moesta, KT, Moller, M, Schlag, PM, Rinneberg, H, and Arridge, S.R. (2005): "Reconstruction of optical properties of phantom and breast lesion in vivo from paraxial scanning data", Physics in Medicine and Biology, 50, 2519-2542.
69. Gibson, A.P., Hebden, J.C., and Arridge, S.R. (2005): "Recent advances in diffuse optical imaging", Physics in Medicine and Biology, 50, R1-R43
70. Hebden, J.C., Yates, T.D., Gibson, A., Everdell, N.L., Arridge, S.R., Chicken, D.W., Douek, M., and Keshtgar, M.R.S. (2005): "Monitoring recovery after laser surgery of the breast with optical tomography: a case study", Applied Optics, 44(10), 1898-1904
71. Schweiger, M., Arridge, S.R., and Nissila, I. (2005): "Gauss-Newton method for image reconstruction in diffuse optical tomography", Physics in Medicine and Biology, 50, 2365-2386
72. Tarvainen, T., Kolehmainen, V., Vauhkonen, M., Vanne, A., Gibson, A.P., Schweiger, M., Arridge, S.R., and Kaipio, J.P. (2005): "Computational calibration method for optical tomography", Applied Optics, 44(10), 1879-1888.
73. Yates, T.D., Hebden, J.C., Gibson, A.P., Everdell, N.L., Arridge, S.R., and Douek M. (2005): "Optical tomography of the breast using a multi-channel time-resolved imager", Physics in Medicine and Biology, 50, 2503-2517
74. Douiri A., Schweiger, M., Riley J., and Arridge, S.R., (2005), "Local diffusion regularisation method for optical tomography reconstruction using robust statistics", Optics Letters, 30(18), 2439-2441
75. Sikora, J., Zacharopoulos, A., Douiri, A., Schweiger. M., Horesh, L., Arridge, S.R., and Ripoll, J. (2006): "Diffuse photon propagation in multilayered Geometries", Physics in Medicine and Biology 51, 497-516. Link to online paper.
76. Arridge, S. R., Kaipio, J. P., Kolehmainen, V., Schweiger, M., Somersalo E., Tarvainen, T., Vauhkonen, M. (2006), "Approximation Errors and Model Reduction with an Application in Optical Diffusion Tomography ", Inverse Problems , 22(1), 175-196
77. Arridge, S.R., Dorn, O., Kaipio, J. P., Kolehmainen, V., Schweiger, M., Tarvainen, T., Vauhkonen, M., Zacharopoulos, A. (2006),"Reconstruction of Subdomain Boundaries of Piecewise Constant Coefficients of the Radiative Transport Equation from Optical Tomography Data", Inverse Problems , 22(6), 2175--2198
78. Zacharopoulos, A., Arridge, S.R., Dorn, O., Kolehmainen, V., Sikora, J. (2006), "Three dimensional reconstruction of shape and piecewise constant region values for Optical Tomography using spherical harmonic parameterisation and a Boundary Element Method", Inverse Problems , 22(5), 1509--1532.
79. Schweiger, M., Arridge, S.R., O.Dorn, A. Zacharopoulos, and Kolehmainen, V. (2006)"Reconstructing absorption and diffusion shape profiles in optical tomography using a level set technique", Optics Letters, 31(4), 471-473.
80. Cox, B.T., Arridge, S.R., Kostli, K.P., and Beard, P.C. (2006). "2D quantitative photoacoustic image reconstruction of absorption distributions in scattering media using a simple iterative method", Applied Optics, 45, 1866-1875.
81. Austin, T., Gibson, A.P., Branco, G., Yusof,R., Arridge, S.R., Meek, J.H., Wyatt, J.S., Delpy, D.T., and Hebden J.C., (2006). "Three-dimensional optical imaging of blood volume and oxygenation in the preterm brain", Neuroimage, 31, 1426-1433.
82 Pineda A. R., Schweiger, M., Arridge, S.R. and Barrett, H.H.,(2006) "Information content of data types in Time-Domain Optical Tomography", J. Opt. Soc Am., 12, 2989-2996.
83. Cox, B.T., Arridge, S.R., and Beard, P.C. (2007):"K-space propagation models for acoustically heterogeneous media: application to biomedical photoacoustics", Journal of the Acoustical Society of America, 121, 3453-3464
84. Corlu, A., Choe, R., Durduran T., Rosen, M. A., Schweiger, M., Arridge, S.R., Schnall, M.D., Yodh, A.G.(2007), "Three-dimensional in vivo fluorescence diffuse optical tomography of breast cancer in humans", Optics Express, 15(11) 6696-6716.
85. Soloviev, V.Y., Tahir, K.B., McGinty, J., Elson, D.S., Neil, M.A.A., French, P.M.W., Arridge, S.R. (2007), "Fluorescence lifetime imaging by using time gated data acquisition",Applied Optics, 46, 7384-7391.
86. Soloviev, V.Y., McGinty, J., Tahir, K.B., Neil, M.A.A., Sardini, A., Hajnal, J.V., Arridge, S.R., French, P.M.W., (2007),"Fluorescence lifetime tomography of live cells expressing enhanced green fluorescent protein embedded in a scattering medium exhibiting background autofluorescence", Optics Letters, 32, 2034-2036.
87. Soloviev, V.Y., D'Andrea, C., Brambilla, M.,Valentini, G., Schulz, R. B., Cubeddu, R., Arridge, S.R. (2008),"Adjoint time domain method for fluorescent imaging in turbid media", Applied Optics, 47,2303--2311
88. Soloviev, V.Y., D'Andrea, C.,Valentini, G., Cubeddu, R., Arridge, S.R., (2008)," Simultaneous reconstruction of optical parameters, quantum yield and lifetime in turbid media using time gated data acquisition technique", Applied Optics, 48,28--36
89. Bassi, A., D'Andrea, C., Valentini, G., Cubeddu, R., Arridge, S.R. (2008), "Temporal propagation of spatial information in turbid media", Optics Letters, 33(23) 2836-2838.
90. Tarvainen, T., Vaukhonen, M., S.R.Arridge, S.R., (2008), "Gauss Newton reconstruction method for optical tomography using the finite element solution of the radiative transfer equation", Journal of Quantitative Spectroscopy and Radiative Transfer, 109, 2767-2778.
91. Chinchapatnam, P., Rhode, K., Ginks, M., King, A., Gao, G., Ma, Y., Schaeffter, T., Rinaldi, C. A., Lambiase, P., Hawkes, D., Razavi,R., Hill, D., Arridge, S.R., and Sermesant, M.,(2008), "Model-based Imaging of Cardiac Local Conductivity for Diagnosis and Planning Therapy", IEEE Trans. Med. Imaging, 27(11) 289-301.
92. Choe, R., Konecky, S.D., Corlu, A., Lee, K., Durduran, T., Busch, D., Pathak, S., Czerniecki, B.J., Tchou, J., Fraker, D. L., DeMichele, Y., Chance, B., Arridge, S.R., Schweiger, M., Schnall, M. D., Putt, M. E., Rosen, M.A., Yodh, A.G. (2009), "Differentiation of Benign and Malignant Breast Tumor by in-vivo Parallel-Plate Diffuse Optical Tomography", J. Biomedical Optics, 14(2)
93. Cox, B.T., Arridge, S.R., and Beard, P.C. (2009) "Estimating chromophore distributions from multiwavelength photoacoustic images", J. Opt. Soc. Am. A, 26(2), 443-445.
94. Bassi, A., D'Andrea, C.,Valentini, G., Cubeddu, R., Arridge, S.R. (2009), "Detection of inhomogeneities in diffusive media using spatially modulated light", Optics Letters, 34, 2156-2158.
95. McGinty, J., Soloviev, V.Y., Tahir, K. B., Laine, R., Stuckey, D. W., Hajnal, J.V., Sardini, A., French, P.M.W., Arridge, S.R. (2009), "Three-dimensional imaging of Forster resonance energy transfer in heterogeneous turbid media by tomographic fluorescent lifetime imaging", Optics Letters, 34(17).
96. Panagiotou, C., Somayajula, S., Gibson, A.P., Schweiger, M., Leahy, R. M., and Arridge, S.R. (2009),"Information Theoretic Regularization in Diffuse Optical Tomography", J. Opt. Soc. Am. A, 26(5), 1277-1290.
97. Kolehmainen, V., Schweiger, M., Nissili, I., Tarvainen, T., Arridge, S.R., Kaipio, J.P. (2009),"Approximation Errors and Model Reduction in Diffuse Optical Tomography", J. Opt. Soc. Am. A, 26(10), 2257-2268.
98. Hiltunen, P., Prince,S., Arridge, S.R. (2009), "A combined reconstruction-classification method for diffuse optical tomography", Phys. Med. Biol., 54, 6457-6476 link to online paper
99. Zacharopoulos, A.D., Schweiger, M., Kolehmainen, V., Arridge, S.R., (2009) "3D shape based reconstruction of experimental data in Diffuse Optical Tomography", Optics Express, 17(21), 18940-18956. Link to online paper
100. Arridge, S.R., Schotland, J.C. (2009), "Optical Tomography: forward and inverse problems", Inverse Problems , 25(12), 123010 (59pp) link to online paper
101. Zacharopoulos A.D., Svenmarker, P., Axelsson, J., Schweiger, M., Arridge, S.R., Andersson-Engels,S., (2009), "A matrix-free algorithm for multiple wavelength fluorescence tomography", Optics express, 17(5), 3042-3051
102. Tarvainen, T., Kolehmainen, V., Pulkkinen, A., Vauhkonen, M., Schweiger, M., Arridge, S.R., Kaipio, J.P. (2010), "An approximation error approach for compensating for modelling errors between the radiative transfer equation and the diffusion approximation in diffuse optical tomography", Inverse Problems 26(1) 015005 (18pp)
103. Schweiger, M., Dorn, O., Zacharopoulos, A.D., Nissila, I., and Arridge, S.R., (2010), "3D level set reconstruction of model and experimental data in Diffuse Optical Tomography", Optics Express 18(1), 150-164. Link to online paper
104. Rudge, T.J., Soloviev, V.Y., Arridge, S.R.,(2010), "Fast image reconstruction in fluoresence optical tomography using data compression", Optics Letters, 35(5), 763-766.
105. Lehtikangas, O., Tarvainen, T., Kolehmainen, V., Pulkkinen, A., Arridge, S.R., Kaipio, J.P. (2010), "Finite element approximation of the Fokker-Planck equation for diffuse optical tomography", Journal of Quantitative Spectroscopy and Radiative Transfer, 111, 1406--1417.
106. Tarvainen, T., Kolehmainen, V., Kaipio, J.P., Arridge, S.R. (2010), "Corrections to linear methods for diffuse optical tomography using approximation error modelling", Biomedical Optics Express 1(1) 209--222 link to online paper
107. D'Andrea, C., Ducros, N., Bassi, A., Arridge, S.R., and Valentini, G. (2010), "Fast 3D optical reconstruction in turbid media using spatially modulated light", Biomedical Optics Express, 1(1), 106--113.
108. V. Y. Soloviev, D'Andrea, C., Mohan, P. S., Valentini, G., Cubeddu, R., and Arridge, S.R. (2010), "Fluorescence lifetime optical tomography by using Discontinuous Galerkin discretisation scheme" Biomedical Optics Express, 1(3), 998-1013
109. Mohan, P.S., Soloviev, V.Y., Arridge, S.R. (2010), "Discontinuous Galerkin method for the forward modelling in optical diffusion tomography," Int. J. Numer. Meth. Engng. 85(5) 562--574.
110. Elisee, J., Gibson, A.P., Arridge, S.R. (2010) "Combination of Boundary Element Method and Finite Element Method in Diffuse Optical Tomography", IEEE Trans Biomed Eng, 57, 2737--2745.
111. Ducros, N., Bassi, A., d'Andrea, C.,T. Rudge, Arridge, S.R.,Valentini, G. (2010), "A full-wavelet approach for fluorescence diffuse optical tomography with structured illumination", Optics Letters, 35, 3676--3678.
112 Somayajula, S., Panagiotou, C., Rangarajan, A., Li, Q.Z., Arridge, S.R., Leahy, R.M. (2011), "PET Image Reconstruction Using Information Theoretic Anatomical Priors", IEEE Trans Med Imag, 30(3), 537-549
113. Elisee, J., Gibson, A.P., Arridge, S.R., (2011), "Diffuse optical cortical mapping using the boundary element method", Biomed. Opt. Express, 2, 568--578. esky/cm/cmss10.pfb>
114. Mohan, P. S., Tarvainen, T., Schweiger, M., Pulkkinen, A., Arridge, S.R. (2011), "Variable order spherical harmonic expansion scheme for the radiative transport equation using finite elements", Journal of Computational Physics, 230, 7364-7383
115. Soloviev, V.Y. and Arridge, S.R., (2011),"Optical Tomography in weakly scattering media in the presence of highly scattering inclusions", Biomed. Opt. Exp.,2, 440--451
116. Correia, T., Aguirre, J., Sisniega, A., Chamorro-Servent, J., Abascal, J., Vaquero, J.J., Desco, M., Kolehmainen, V., and Arridge, S.R., (2011), "Split operator method for fluorescence diffuse optical tomography using anisotropic diffusion regularisation with prior anatomical information", Biomedical Optics Express, 2(9), 2632-2648.
117. Elisee, J., Bonnet, M., Arridge, S.R., (2011), "Accelerated Boundary Element Method for Diffuse Optical Imaging", Optics Letters, 36(20), 4101-4103.
118. Arridge, S.R. (2011), "Methods in diffuse optical imaging", Phil. Trans. R. Soc. A, 369, 4558-4576. Link to online paper
119. Ducros, N., Bassi, A.,Valentini, G., Schweiger, M., Arridge, S.R., d'Andrea, C., (2011), "Multiple view fluorescence optical tomography using compression of experimental data", Optics Letters, 36, 1377-1379
120. Arridge, S.R., Moskow, S., and Schotland, J. C., (2012), "Inverse Born series for the Calderon problem ", Inverse Problems 28(3) 035003 (16pp) Link to online paper
121. Soloviev, V.Y., Zacharakis, G., Spiliopoulos, G., Favicchio, R., Correia, T., Arridge, S.R., and Ripoll, J., (2012), "Tomographic imaging with polarized light", J.Opt.Soc.Am. A, 29(6), 980-988
122. Cox, B.T., Laufer, J. G., Arridge, S.R., and Beard, P. C. (2012), "Quantitative spectroscopic photoacoustic imaging: a review", J. Biomed. Opt., 17, 061202, DOI:10.1117/1.JBO.17.6.061202
123. Ducros, N., D'Andrea, C., Bassi, A.,Valentini, G. and Arridge, S.R., (2012) "A virtual source pattern method for fluorescence tomography with structured light" Phys. Med. Biol., 57, 3811--3832, doi:10.1088/0031-9155/57/12/3811
124. Arridge, S.R., and Scherzer, O., (2012),"Imaging from coupled physics", Inverse Problems, 28, 080201 doi:10.1088/0266-5611/28/8/080201
125. Tarvainen,T., Cox, B.T., Kaipio J.P., and Arridge S.R., (2012), "Reconstructing absorption and scattering distributions in quantitative photoacoustic tomography", Inverse Problems, 28, 084009 doi:10.1088/0266-5611/28/8/084009
126. Bousse, A., Pedemonte, S., Thomas, B. A, Erlandsson, K., Ourselin, S., Arridge, S.R., and Hutton, B. F, (2012), "Markov random field and Gaussian mixture for segmented MRI-based partial volume correction in PET", Phys. Med. Biol. 57 6681 doi:10.1088/0031-9155/57/20/6681 Link to online paper
127. Heiskala, J., Kolehmainen, V., Tarvainen, T., Kaipio, J. P., Arridge, S. R., (2012), "Approximation error method can reduce artifacts due to scalp blood flow in optical brain activation imaging", J. Biomed. Opt., 17(9), 096012
128. Cade, S.C., Arridge, S.R., Evans, M.J., Hutton, B.F. (2013). "Use of measured scatter data for the attenuation correction of single photon emission tomography without transmission scanning." Medical Physics, 40(8), ARTN 082506 doi:10.1118/1.4812686.
129. Correia, T., Ducros, N., D'Andrea, C., Schweiger, M., Arridge, S. (2013). "Quantitative fluorescence diffuse optical tomography in the presence of heterogeneities." Optics Letters, 38(11), 1903-1905 doi:10.1364/OL.38.001903.
130. Correia, T., Rudge, T., Koch, M., Ntziachristos, V., Arridge, S. (2013). "Wavelet-based data and solution compression for efficient image reconstruction in fluorescence diffuse optical tomography." J. Biomed. Opt., 18(8), ARTN 086008 doi:10.1117/1.JBO.18.8.086008.
131. Ducros, N., Bassi, A., Valentini, G., Canti, G., Arridge, S., D'Andrea, C. (2013). "Fluorescence molecular tomography of an animal model using structured light rotating view acquisition". J. Biomed. Opt., 18(2), ARTN 020503 doi:10.1117/1.JBO.18.2.020503.
132. Hutton, B. F., Thomas, B. A., Erlandsson, K., Bousse, A., Reilhac-Laborde, A., Kazantsev, D., Pedemonte, S., Vunckx, K., Arridge, S. R., Ourselin, S. (2013). "What approach to brain partial volume correction is best for PET/MRI?" Nuclear Instruments & Methods in Physics Research Section A-Accelerators Spectrometers Detectors and Associated Equipment , 702, 29-33 doi:10.1016/j.nima.2012.07.059.
133. Saratoon, T., Tarvainen, T., Cox, B. T., Arridge, S. R. (2013). "A gradient-based method for quantitative photoacoustic tomography using the radiative transfer equation". Inverse Problems, 29(7), doi:10.1088/0266-5611/29/7/075006.
134. Tarvainen, T., Pulkkinen, A., Cox, B.T., Kaipio, J.P., Arridge, S.R.,(2013). "Bayesian Image Reconstruction in Quantitative Photoacoustic Tomography", IEEE Transactions on Medical Imaging, 32(12),page(s): 2287-2298
135. Arridge, S.R., Egger, H., Schlottbom, M., (2013), "Preconditioning of complex symmetric linear systems with applications in optical tomography", Applied Numerical Mathematics, 74, 35-48
136. Mozumder M., Tarvainen T., Arridge S.R., Kaipio J., Kolehmainen V., (2013), "Compensation of optode sensitivity and position errors in diffuse optical tomography using the approximation error approach", Biomedical Optics Express, 4(10):2015-2031.
137. Ehrhardt, M. J. and Arridge, S.R., (2014), "Vector-Valued Image Processing by Parallel Level Sets", IEEE Transactions on Image Processing, 23, 1, Pages 9-18, January 2014
138. Arridge, S. R., Betcke, M. M., Harhanen, L. (2014). "Iterated preconditioned LSQR method for inverse problems on unstructured grids.", Inverse Problems, 30(7), doi:10.1088/0266-5611/30/7/075009.
139. Brigadoi, S., Aljabar, P., Kuklisova-Murgasova, M., Arridge, S.R., Cooper, R.J., (2014), "A 4D neonatal head model for diffuse optical imaging of pre-term to term infants." NeuroImage, 100,385-394
140. Burgos, N., Cardoso, M., Thielemans, K., Modat, M., Schott, J., Duncan, J., Atkinson, D., Arridge, S.R., Hutton, B., Ourselin, S. (2014). "Attenuation Correction Synthesis for Hybrid PET-MR Scanners: Application to Brain Studies.", IEEE Trans Med Imaging, doi:10.1109/TMI.2014.2340135.
141. Fuin, N., Pedemonte, S., Arridge, S.R., Ourselin, S., Hutton, B. F. (2014). "Efficient Determination of the Uncertainty for the Optimization of SPECT System Design: A Subsampled Fisher Information Matrix." IEEE Trans Med Imaging, 33(3) , 618-635 doi:10.1109/TMI.2013.2292805.
142. Kazantsev, D., Ourselin, S., Hutton, B. F., Lionheart, W. R. B., Arridge, S. R. (2014). "A novel technique to incorporate structural prior information into multi-modal tomographic reconstruction." Inverse problems, (in Press)
143. Malone, E., dos Santos, G. S., Holder, D., Arridge, S.R. (2014). "Multifrequency electrical impedance tomography using spectral constraints" IEEE Trans Med Imaging, 33(2) , 340-350 doi:10.1109/TMI.2013.2284966.
144. Malone, E., Jehl, M., Arridge, S. R., Betcke, T., Holder, D. (2014). "Stroke type differentiation using spectrally constrained multifrequency EIT: Evaluation of feasibility in a realistic head model. " Physiological Measurement, 35 , pp.1051-1066.
145. Mozumder, M., Tarvainen, T., Kaipio, J.P., Arridge, S.R., Kolehmainen, V., (2014), "Compensation of modeling errors due to unknown domain boundary in diffuse optical tomography." J. Opt. Soc. Am. A, 31 , 1847-1855
146. Pulkkinen, A., Cox, B. T., Arridge, S. R., Kaipio, J. P., Tarvainen, T. (2014). "A Bayesian approach to spectral quantitative photoacoustic tomography." Inverse Problems, 30(6), doi:10.1088/0266-5611/30/6/065012.
147. Pulkkinen, A., Kolehmainen, V., Kaipio, J.P. , Cox, B.T., Arridge S.R., Tarvainen T. (2014), "Approximate Marginalization, of Unknown Scattering In Quantitative Photoacoustic Tomography." Inverse Problems and Imaging, 8(3), doi:10.3934/ipi.2014.8.811
148. Schweiger, M., Arridge, S.R. (2014). "The TOAST++ software suite for forward and inverse modeling in optical tomography. " Journal of Biomedical Optics, 19(4), doi:10.1117/1.JBO.19.4.040801.
149. Tremoulheac, B. R., Dikaios, N., Atkinson, D., Arridge, S.R. (2014). "Dynamic MR image reconstruction-separation from undersampled (k,t)-Space via low-rank plus sparse prior." IEEE Transactions on Medical Imaging, 33(8), 1689-1701 doi:10.1109/TMI.2014.2321190.
150. Wang, P., Arridge, S.R., Jiang, M., (2014), "Radiative transfer equation for media with spatially varying refractive index." Phys. Rev. A, 90(2), doi: 10.1103/PhysRevA.90.023803
151. T Correia, N Lockwood, S Kumar, J Yin, MC Ramel, N Andrews, M Katan, et. al. "Accelerated Optical Projection Tomography Applied to In Vivo Imaging of Zebrafish", PloS one, 10 (8), e0136213, 2015
152. N. Burgos, M.J. Cardoso, K. Thielemans, M. Modat, J. Dickson, J.M. Schott, S.Arridge et.al., "Multicontrast attenuation map synthesis for PET/MR scanners: assessment on FDG and Florbetapir PET tracers", European journal of nuclear medicine and molecular imaging, 42 (9), 1447-1458, 2015
153. Ehrhardt, M., Thielemans, K., Pizarro, L., Atkinson, D., Ourselin, S., Hutton, B., Arridge, S. (2015) "Joint reconstruction of PET-MRI by exploiting structural similarity", Inverse Problems 31(1):23 pages Article number 015001
154. J. Jiao, P. Markiewicz, N. Burgos, D. Atkinson, B. Hutton, S. Arridge, et.al., "Detail-Preserving PET Reconstruction with Sparse Image Representation and Anatomical Priors", Information Processing in Medical Imaging, 540-551, 2015
155. H. Sari, K. Erlandsson, K. Thielemans, D. Atkinson, S. Ourselin, S. Arridge, et.al,. "Incorporation of MRI-AIF Information For Improved Kinetic Modelling of Dynamic PET Data", Nuclear Science, IEEE Transactions on, 62 (3), 612-618, 2015
156. A.D. Mora, E. Martinenghi, D. Contini, A. Tosi, G. Boso, T. Durduran, S. Arridge, et.al., "Fast silicon photomultiplier improves signal harvesting and reduces complexity in time-domain diffuse optics", Optics Express, 23 (11), 13937-13946, 5, 2015.
157. R. Manber, K. Thielemans, B. Hutton, A. Barnes, S. Ourselin, S. Arridge, et.al., "Practical PET Respiratory Motion Correction in Clinical PET/MR", Journal of Nuclear Medicine, jnumed. 114.151779, 2015
158. A.D. Mora, D. Contini, S. Arridge, F. Martelli, A. Tosi, G. Boso, A. Farina, et.al., "Towards next-generation time-domain diffuse optics for extreme depth penetration and sensitivity", Biomedical Optics Express, 6 (5), 1749-1760, 8, 2015
159. A. Pulkkinen, B.T. Cox, S.R. Arridge, J.P. Kaipio, T. Tarvainen, "Quantitative photoacoustic tomography using illuminations from a single direction", Journal of biomedical optics, 20 (3), 036015-036015, 1 2015
159. W. Smigaj, T. Betcke, S. Arridge, J. Phillips, M. Schweiger, "Solving boundary integral problems with BEM++", ACM Transactions on Mathematical Software (TOMS), 41 (2), 6, 2015
160. R Manber, K Thielemans, BF Hutton, S Wan, J McClelland, A Barnes, ... S.Arridge "Joint PET-MR respiratory motion models for clinical PET motion correction" Physics in Medicine and Biology, 61 (17), 6515, 2016
161. HY Ban, M Schweiger, VC Kavuri, JM Cochran, L Xie, DR Busch, ... S.Arridge "Heterodyne frequency-domain multispectral diffuse optical tomography of breast cancer in the parallel-plane transmission geometry" Medical Physics, 43 (7), 4383-4395, 2016
162. H Sari, K Erlandsson, I Law, HBW Larsson, S Ourselin, S Arridge, et.al. "Estimation of an image derived input function with MR-defined carotid arteries in FDG-PET human studies using a novel partial volume correction method" Journal of Cerebral Blood Flow & Metabolism, 0271678X16656197, 2016
163. PJ Markiewicz, K Thielemans, JM Schott, D Atkinson, SR Arridge, et.al. "Rapid processing of PET list-mode data for efficient uncertainty estimation and data analysis". Physics in medicine and biology 61 (13), N322-N336, 2016
164. S Kumar, N Lockwood, MC Ramel, T Correia, M Ellis, Y Alexandrov, ..., S.Arridge "Quantitative in vivo optical tomography of cancer progression & vasculature development in adult zebrafish." Oncotarget, 2016
165. P Markiewicz, J Schott, D Atkinson, S Arridge, B Hutton, S Ourselin "Infrastructure for efficient multi-component uncertainty estimation of SUVR values in amyloid PET imaging", Journal of Nuclear Medicine (supplement 2), 480-480, 2016
166. K Erlandsson, J Dickson, S Arridge, D Atkinson, S Ourselin, BF Hutton "MR Image Guided Partial Volume Correction of PET Data in PET/MR Imaging" PET clinics 11 (2), 161-177, 2016
167. MJ Ehrhardt, P Markiewicz, M Liljeroth, A Barnes, V Kolehmainen, ..., S.Arridge "PET Reconstruction with an Anatomical MRI Prior using Parallel Level Sets" IEEE Trans Med Imaging, 2016
168. K Erlandsson, M Liljeroth, D Atkinson, S Arridge, S Ourselin, BF Hutton "Improved Parameter-Estimation With MRI-Constrained PET Kinetic Modeling: A Simulation Study" IEEE Trans Med Imaging, 2016
169. S Powell, SR Arridge, TS Leung "Gradient-based quantitative image reconstruction in ultrasound-modulated optical tomography: first harmonic measurement type in a linearised diffusion formulation", IEEE transactions on medical imaging 35 (2), 456-467, 2016
170. T Correia, S Arridge "Patch-based anisotropic diffusion scheme for fluorescence diffuse optical tomography--part 1: technical principles" Physics in medicine and biology 61 (4), 1439, 2016
171. T Correia, M Koch, A Ale, V Ntziachristos, S Arridge "Patch-based anisotropic diffusion scheme for fluorescence diffuse optical tomography--part 2: image reconstruction" Physics in medicine and biology 61 (4), 1452, 2016
172. A Bousse, O Bertolli, D Atkinson, S Arridge, S Ourselin, BF Hutton, et.al. "Maximum-likelihood joint image reconstruction and motion estimation with misaligned attenuation in TOF-PET/CT" Physics in medicine and biology, 61 (3), L11, 2016
173. N Huynh, E Zhang, M Betcke, S Arridge, P Beard, B Cox "Single-pixel optical camera for video rate ultrasonic imaging" Optica, 3 (1), 26-29, 2016
174. A Bousse, O Bertolli, D Atkinson, S Arridge, S Ourselin, BF Hutton, et.al. "Maximum-likelihood joint image reconstruction/motion estimation in attenuation-corrected respiratory gated PET/CT using a single attenuation map" IEEE transactions on medical imaging, 35 (1), 217-228, 2016
175. A. Pulkkinen, B.T. Cox, S.R. Arridge, H. Goh, J.P. Kaipio, T. Tarvainen "Direct Estimation of Optical Parameters From Photoacoustic Time Series in Quantitative Photoacoustic Tomography", IEEE Transactions on Medical Imaging, 35 (11), 2497-2508, 2016 link to online paper
176. SR Arridge, MM Betcke, BT Cox, F Lucka, BE Treeby "On the adjoint operator in photoacoustic tomography" Inverse Problems, 32 (11), 115012, 2016.
177. S Arridge, P Beard, M Betcke, B Cox, N Huynh, F Lucka, O Ogunlade, E.Zhang, "Accelerated high-resolution photoacoustic tomography via compressed sensing" Physics in medicine and biology, 61 (24), 8908, 2016
178. M Schweiger, S Arridge "Basis mapping methods for forward and inverse problems" International Journal for Numerical Methods in Engineering, 109 (1), 3-28, 2017
179. J Jiao, A Bousse, K Thielemans, N Burgos, PSJ Weston, JM Schott, S.Arridge, K.Thielmans, B.Hutton, "Direct parametric reconstruction with joint motion estimation/correction for dynamic brain PET data" IEEE transactions on medical imaging, 36 (1) , 203-213, 2017
180. S Tagliabue, L Di Sieno, A Farina, E Martinenghi, S Arridge, F Martelli, ... "Near-infrared, time-resolved optical tomography with a novel compact system", J. CEREBRAL BLOOD FLOW AND METABOLISM, 37, 356-357, 2017
181. H Sari, K Erlandsson, I Law, HBW Larsson, S Ourselin, S Arridge, K.Thielmans, B.Hutton, Estimation of an image derived input function with MR-defined carotid arteries in FDG-PET human studies using a novel partial volume correction method Journal of Cerebral Blood Flow \& Metabolism 37 (4), 1398-1409, 2017
182. O Bertolli, S Arridge, SD Wollenweber, CW Stearns, BF Hutton, K.Thielemans, Sign determination methods for the respiratory signal in data-driven PET gating Physics in Medicine and Biology, 62 (8), 3204, 2017.
183. JR McClelland, M Modat, S Arridge, H Grimes, D D'Souza, D Thomas, K.Thielmans, B.Hutton, A generalized framework unifying image registration and respiratory motion models and incorporating image reconstruction, for partial image data or full images Physics in Medicine and Biology, 62 (11), 4273, 2017.
184. A Bousse, R Manber, BF Holman, D Atkinson, S Arridge, S Ourselin, K.Thielmans, B.Hutton, "Evaluation of a Direct Motion Estimation/Correction Method in Respiratory-Gated PET/MRI with Motion-Adjusted Attenuation", Medical Physics, 44(6), 2379-2390, 2017.
185. Andrea Farina, Marta Betcke, Laura Di Sieno, Andrea Bassi, Nicolas Ducros, Antonio Pifferi, Gianluca Valentini, Simon Arridge, Cosimo D'Andrea, "Multiple-view diffuse optical tomography system based on time-domain compressive measurements", Optics Letters, 42(14), 2822-2825, 2017.
186. Andrea Farina, Susanna Tagliabue, Laura Di Sieno, Edoardo Martinenghi, Turgut Durduran, Simon Arridge, Fabrizio Martelli, Alessandro Torricelli, Antonio Pifferi, Alberto Dalla Mora "Time-Domain Functional Diffuse Optical Tomography System Based on Fiber-Free Silicon Photomultipliers" Applied Sciences, 7(12), 1235, 2017.
187. MM Betcke, BT Cox, N Huynh, EZ Zhang, PC Beard, SR Arridge, "Acoustic wave field reconstruction from compressed measurements with application in photoacoustic tomography" IEEE Transactions on Computational Imaging, 3 (4), 710-721, 2017.
188. PJ Markiewicz, MJ Ehrhardt, K Erlandsson, PJ Noonan, A Barnes, JM Schott, D Atkinson, SR Arridge, BF Hutton, S Ourselin, "NiftyPET: A high-throughput software platform for high quantitative accuracy and precision PET imaging and analysis" Neuroinformatics, 16 (1), 95-115, 2018.
189. SR Arridge, K Ito, B Jin, C Zhang, "Variational Gaussian approximation for Poisson data" Inverse Problems, 34 (2), 025005, 2018.
190. AK Jha, Y Zhu, S Arridge, DF Wong, A Rahmim "Incorporating reflection boundary conditions in the Neumann series radiative transport equation: application to photon propagation and reconstruction in diffuse optical imaging" Biomedical optics express, 9 (4), 1389-1407, 2018.
191. YJ Tsai, A Bousse, MJ Ehrhardt, CW Stearns, S Ahn, BF Hutton, SR Arridge, K.Thielemans, "Fast Quasi-Newton Algorithms for Penalized Reconstruction in Emission Tomography and Further Improvements via Preconditioning" IEEE transactions on medical imaging, 37 (4), 1000-1010, 2018.
192. KI Papadimitriou, LA Dempsey, JC Hebden, SR Arridge, S Powell, "A spread spectrum approach to time-domain near-infrared diffuse optical imaging using inexpensive optical transceiver modules" Biomedical Optics Express, 9 (6), 2648-2663 2018
193. G Yang, S Yu, H Dong, G Slabaugh, PL Dragotti, X Ye, F Liu, S Arridge, J Keegan, Y Guo, D Firmin, "Dagan: Deep de-aliasing generative adversarial networks for fast compressed sensing MRI reconstruction" IEEE transactions on medical imaging, 37 (6), 1310-1321, 2018.
194. A Hauptmann, F Lucka, M Betcke, N Huynh, J Adler, B Cox, P Beard, S Ourselin, SR Arridge "Model-Based Learning for Accelerated, Limited-View 3-D Photoacoustic Tomography" IEEE transactions on medical imaging, 37 (6), 1382-1393, 2018.
195. O Bertolli, T Sanderson, A Alnaim, MYS Wan, S Wollenweber, C Stearns, BF Hutton, SR Arridge, K.Thielemans, "Evaluation of data-driven respiratory gating in PET with PCA" Journal of Nuclear Medicine, 59 (supplement 1), 9-9, 2018.
196. C Bulgarelli, A Blasi, S Arridge, S Powell, CCJM de Klerk, V Southgate, S Brigadoi, W Penny, S Tak, A Hamilton "Dynamic causal modelling on infant fNIRS data: A validation study on a simultaneously recorded fNIRS-fMRI dataset", NeuroImage, 175, 413-424, 2018.
197. J Tick, A Pulkkinen, F Lucka, R Ellwood, BT Cox, JP Kaipio, SR Arridge, T Tarvainen, "Three dimensional photoacoustic tomography in Bayesian framework", The Journal of the Acoustical Society of America, 144 (4), 2061-2071, 2018.
198. M Usman, L Kakkar, A Kirkham, S Arridge, D Atkinson "Model-based reconstruction framework for correction of signal pile-up and geometric distortions in prostate diffusion MRI", Magnetic resonance in medicine, , 2018.
199. A Hauptmann, S Arridge, F Lucka, V Muthurangu, JA Steeden, "Real-time cardiovascular MR with spatio-temporal artifact suppression using deep learning-proof of concept in congenital heart disease" Magnetic resonance in medicine, , 2018.
200. R Manber, K Thielemans, BF Hutton, S Wan, F Fraioli, A Barnes, S Ourselin, SR Arridge, D Atkinson, "Clinical Impact of Respiratory Motion Correction in Simultaneous PET/MR, Using a Joint PET/MR Predictive Motion Model", Journal of Nuclear Medicine, 59 (9), 1467-1473, 2018.
201. WSPX Davis, L Wisniewski, S Kumar, T Correia, SR Arridge, P Frankel, J Mcginty, PMW French, "Slice-illuminated optical projection tomography", Optics letters, 43 (22), 5555-5558, 2018.