make_h_sapiens_ncbi37.p5_wbl.sh
make_h_sapiens_ncbi37.p5_wbl.sh
Scratch version (Dated Oct 28 14:36, 2011) of
script to build bowtie2 database from NCBI human genome release 37 patch 5
See also
http://www.biostars.org/post/show/13508/comparing-bowtie-h_sapiens_asm-blastn-task-blastn-short-db-human_genomic/
No Raspberry PI Bowtie2
The Bowtie2 Makefile contains SSE_FLAG=-msse2.
It appears the RPI, which has an ARM processor CPU,
which does not have SSE instructions.
However
Ben Langmead
says:
there's no way to compile Bowtie 2 without SSE support.
W.B.Langdon 28 Oct 2011
(Converted to HTML and updated 20 Aug 2012)
Original
non-HTML file.